ytpP [2019-09-04 10:36:33]

similar to thioredoxin H1

locus: BSU_29840

pI: 4.30

mw: 12.61 kDa

protein length: 107 aa

gene length: 324 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 2|Metabolism] → [category|SW 2.1|Electron transport and ATP synthesis] → [category|SW 2.1.4|Electron transport/ other/ based on similarity]

Gene

Coordinates: 3,054,188 3,054,511

The protein

Structure

• [PDB|4RUV] (Thioredoxin-2 from Staphylococcus aureus, 32% identity)

Expression and Regulation

Operons

• genes: [gene|314D5C01B4BDDC3B122F6D4066647B143B2A6543|ytpP]-[gene|886EF2F8A9E031FDF919E01A858C1DBC1AFF1188|ytpQ]-[gene|EE559CD606562097F09DC627F431CA31129D7BC6|ytpR]
  description: [Pubmed|21949854]

  sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|21949854], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]

  regulatory mechanism

  • [protein|2C6386E9A63F410558D168798D077DF91590F454|Spx]: activation, [Pubmed|21949854], in [regulon|2C6386E9A63F410558D168798D077DF91590F454|Spx regulon]

Biological materials

Mutant

• MGNA-B531 (ytpP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1530 NBRP B. subtilis, Japan]
• BKE29840 ([gene|314D5C01B4BDDC3B122F6D4066647B143B2A6543|ytpP]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE29840 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCATATCCCTCCAGTT, downstream forward: _UP4_AAAGCGTAAAGGAGGACATC
• BKK29840 ([gene|314D5C01B4BDDC3B122F6D4066647B143B2A6543|ytpP]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK29840 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCATATCCCTCCAGTT, downstream forward: _UP4_AAAGCGTAAAGGAGGACATC

References

• 21949854